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  5. Gb_31428

Gb_31428


Description : no hits & (original description: none)


Gene families : OG0000451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31428

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00174960 NF-YA10,... RNA biosynthesis.transcriptional activation.NF-Y... 0.06 OrthoFinder output from all 47 species
AT1G30500 NF-YA7 nuclear factor Y, subunit A7 0.03 OrthoFinder output from all 47 species
AT5G06510 NF-YA10 nuclear factor Y, subunit A10 0.04 OrthoFinder output from all 47 species
GSVIVT01016790001 HAP2C, NF-YA3, ATHAP2C RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
GSVIVT01022601001 NF-YA10 RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
LOC_Os03g07880.1 NF-YA6, LOC_Os03g07880 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os10g25850.1 NFYA5, NF-YA5,... component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g42400.2 NF-YA10, LOC_Os12g42400 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
MA_10431570g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435070g0010 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
MA_17313g0010 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
MA_72133g0010 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Msp_g09391 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Nbi_g07832 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Nbi_g26123 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.06 OrthoFinder output from all 47 species
Pir_g29216 NF-YA9 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Pnu_g26048 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006539 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Sam_g18503 No alias component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Sam_g35457 No alias component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Zm00001e001966_P001 NF-YA6, Zm00001e001966 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e003259_P001 NF-YA10, Zm00001e003259 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e005004_P001 NF-YA10, Zm00001e005004 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e005342_P003 NF-YA7, Zm00001e005342 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!