Aliases : REME1
Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 578.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00220350 | OTP85,... | Pentatricopeptide repeat-containing protein At2g02980,... | 0.03 | OrthoFinder output from all 47 species | |
AT2G44880 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G13770 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01003422001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010647001 | SLO1 | Pentatricopeptide repeat-containing protein At2g22410,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01016874001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024588001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_04077 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_04990 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_05259 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_08834 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.05 | OrthoFinder output from all 47 species | |
Gb_09704 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Gb_11545 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_11581 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.07 | OrthoFinder output from all 47 species | |
Gb_21580 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_29995 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
Gb_32227 | OTP84 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36081 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_37517 | CRR22 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
Gb_38129 | OTP84 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g09800.1 | OTP82, LOC_Os02g09800 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
MA_100606g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_101084g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_10214098g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_10257685g0010 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10277392g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
MA_103380g0010 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
MA_10426261g0020 | CRR22 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_10427342g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.06 | OrthoFinder output from all 47 species | |
MA_10429540g0010 | LOI1, MEF11 | Pentatricopeptide repeat-containing protein At4g14850... | 0.07 | OrthoFinder output from all 47 species | |
MA_10429837g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_10430355g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_10432670g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_10432670g0020 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436764g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
MA_107723g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_112066g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
MA_112594g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
MA_114722g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_115669g0020 | EMB2758 | Pentatricopeptide repeat-containing protein DOT4,... | 0.07 | OrthoFinder output from all 47 species | |
MA_119635g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_12023g0010 | No alias | RNA editing factor (MEF9) | 0.04 | OrthoFinder output from all 47 species | |
MA_13022g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
MA_13057g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_131g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_135424g0010 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
MA_141731g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.09 | OrthoFinder output from all 47 species | |
MA_153011g0010 | MEF1 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
MA_16226g0010 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.05 | OrthoFinder output from all 47 species | |
MA_16339g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_1673g0010 | No alias | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
MA_178429g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_18383g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
MA_184104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_193080g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g33170... | 0.07 | OrthoFinder output from all 47 species | |
MA_20899g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_215359g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_23144g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
MA_2473g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
MA_291996g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_305950g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_30632g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_33151g0010 | OTP86 | Pentatricopeptide repeat-containing protein At1g18485... | 0.07 | OrthoFinder output from all 47 species | |
MA_3449g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
MA_3471g0010 | OTP84 | RNA editing factor (MEF19) | 0.06 | OrthoFinder output from all 47 species | |
MA_35442g0010 | No alias | RNA editing factor (SLO2) | 0.05 | OrthoFinder output from all 47 species | |
MA_3612g0010 | CRR22 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
MA_376862g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_392600g0010 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
MA_42343g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_43727g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
MA_442926g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.07 | OrthoFinder output from all 47 species | |
MA_4503g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.09 | OrthoFinder output from all 47 species | |
MA_483636g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_49292g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_502206g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | OrthoFinder output from all 47 species | |
MA_519985g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_5481g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
MA_55967g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_56322g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_56660g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.07 | OrthoFinder output from all 47 species | |
MA_57048g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
MA_59148g0010 | CRR22 | RNA editing factor (MEF11) | 0.07 | OrthoFinder output from all 47 species | |
MA_59599g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
MA_61422g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
MA_63139g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_632994g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.05 | OrthoFinder output from all 47 species | |
MA_6329g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_640827g0010 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_696621g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_7379g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
MA_73895g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
MA_742g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species | |
MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.07 | OrthoFinder output from all 47 species | |
MA_778985g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
MA_794605g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
MA_81105g0010 | REME1 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
MA_84538g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_858608g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_8868720g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_90090g0010 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.06 | OrthoFinder output from all 47 species | |
MA_905781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.05 | OrthoFinder output from all 47 species | |
MA_9354530g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_9384g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | OrthoFinder output from all 47 species | |
MA_9463538g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_96662g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
MA_97789g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g26540... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 33 | 52 |
IPR002885 | Pentatricopeptide_repeat | 197 | 222 |
IPR032867 | DYW_dom | 558 | 682 |
IPR002885 | Pentatricopeptide_repeat | 57 | 103 |
IPR002885 | Pentatricopeptide_repeat | 122 | 169 |
IPR002885 | Pentatricopeptide_repeat | 223 | 254 |
IPR002885 | Pentatricopeptide_repeat | 285 | 332 |
IPR002885 | Pentatricopeptide_repeat | 385 | 433 |
No external refs found! |