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  5. Gb_31020

Gb_31020 (AtOCT1, 1-Oct)


Aliases : AtOCT1, 1-Oct

Description : organic cation transporter (OCT)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00186620 3-Oct, ATOCT3,... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
Als_g51667 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08959.t1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g37530.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Ore_g31037 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g074850.3.1 3-Oct, ATOCT3,... Organic cation/carnitine transporter 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g017380.3.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 27 128
No external refs found!