1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g05690

LOC_Os03g05690 (Os03g0151400)


Aliases : Os03g0151400

Description : 27.3.57 RNA.regulation of transcription.JUMONJI family Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.


Gene families : OG_01_0003785 (Gene family) Phylogenetic Tree(s): OG0003785_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g05690
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT5G04240 ELF6 Zinc finger (C2H2 type) family protein / transcription... 0.04 Gene family
Solyc04g028560.3.1 Solyc04g028560.3 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 639 665
IPR013087 Znf_C2H2_type 556 578
No external refs found!