Gb_30856


Description : Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana (sp|q6aww5|y5262_arath : 85.1)


Gene families : OG0000490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30856

Target Alias Description ECC score Gene Family Method Actions
Als_g14447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20523.t1 Aspi01Gene20523 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51733.t1 Aspi01Gene51733 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01062 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_11502 AGD2 Ankyrin repeat-containing protein At5g02620... 0.05 OrthoFinder output from all 47 species
Gb_18516 No alias Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
Gb_27685 KEG Ankyrin repeat-containing protein At5g02620... 0.05 OrthoFinder output from all 47 species
Gb_29613 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30355 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_38074 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_38713 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g28087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016791 No alias not classified & original description: CDS=223-3606 0.03 OrthoFinder output from all 47 species
Sam_g05225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g41351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 685 745
IPR020683 DUF3447 325 422
IPR020683 DUF3447 589 665
IPR020683 DUF3447 423 488
IPR011646 KAP_P-loop 868 1319
No external refs found!