Aliases : CRR22
Description : RNA editing factor (CRR21)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00032470 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00019p00093260 | SLO1,... | Pentatricopeptide repeat-containing protein At2g22410,... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g24343 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.11G067400.1 | Ceric.11G067400 | not classified & original description: pacid=50595438... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.15G066400.1 | Ceric.15G066400 | not classified & original description: pacid=50640755... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.23G075200.1 | Ceric.23G075200 | not classified & original description: pacid=50610693... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01000420001 | MEF22 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01012174001 | No alias | Pentatricopeptide repeat-containing protein At2g03380,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015087001 | CRR2 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01024915001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01026881001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01029347001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01031265001 | LPA66 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01031292001 | No alias | Pentatricopeptide repeat-containing protein At1g56690,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_00201 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_00259 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.07 | OrthoFinder output from all 47 species | |
Gb_04616 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Gb_07570 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
Gb_07872 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
Gb_08118 | CRR22 | Pentatricopeptide repeat-containing protein At5g16860... | 0.06 | OrthoFinder output from all 47 species | |
Gb_08619 | No alias | RNA editing factor (MEF19) | 0.05 | OrthoFinder output from all 47 species | |
Gb_08744 | CRR22 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_08964 | CRR2 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_10157 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Gb_11039 | VAC1, ECB2, ATECB2 | RNA editing factor (CRR21) | 0.05 | OrthoFinder output from all 47 species | |
Gb_11221 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
Gb_12240 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
Gb_13303 | CRR22 | RNA editing factor (MEF19) | 0.06 | OrthoFinder output from all 47 species | |
Gb_13369 | No alias | RNA editing factor (MEF12) | 0.06 | OrthoFinder output from all 47 species | |
Gb_14172 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_14324 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_14392 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_14403 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15506 | CRR22 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_15639 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15644 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15797 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_16448 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
Gb_17094 | CRR22 | RNA editing factor (MEF19) | 0.04 | OrthoFinder output from all 47 species | |
Gb_17095 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_19924 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.07 | OrthoFinder output from all 47 species | |
Gb_20634 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
Gb_23083 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_23088 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_23678 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_23967 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_25130 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_26010 | No alias | RNA editing factor (OTP82) | 0.07 | OrthoFinder output from all 47 species | |
Gb_26154 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_26340 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.06 | OrthoFinder output from all 47 species | |
Gb_27469 | CRR22 | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Gb_27491 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_27521 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.08 | OrthoFinder output from all 47 species | |
Gb_28759 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
Gb_28770 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_28780 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_30523 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
Gb_30991 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Gb_33062 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_33367 | No alias | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_33719 | No alias | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_33828 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | OrthoFinder output from all 47 species | |
Gb_36177 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_36178 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
Gb_40436 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Len_g04775 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_11138g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
MA_217g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
MA_392600g0010 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
MA_50789g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
MA_52613g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_5481g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
MA_597g0020 | DOT4 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_81105g0010 | REME1 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
MA_8319g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
MA_858608g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
Smo111891 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e001200_P001 | Zm00001e001200 | Pentatricopeptide repeat-containing protein At5g59600... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015358_P001 | Zm00001e015358 | Pentatricopeptide repeat-containing protein At5g39350... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e031660_P001 | Zm00001e031660 | Pentatricopeptide repeat-containing protein At4g14170... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e038919_P001 | Zm00001e038919 | Pentatricopeptide repeat-containing protein At5g15300... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 569 | 592 |
IPR002885 | Pentatricopeptide_repeat | 392 | 440 |
IPR002885 | Pentatricopeptide_repeat | 230 | 277 |
IPR002885 | Pentatricopeptide_repeat | 129 | 176 |
IPR002885 | Pentatricopeptide_repeat | 494 | 542 |
IPR002885 | Pentatricopeptide_repeat | 360 | 389 |
IPR002885 | Pentatricopeptide_repeat | 329 | 357 |
No external refs found! |