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  5. Gb_29958

Gb_29958 (WOX1)


Aliases : WOX1

Description : transcription factor (WOX)


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29958
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00020930 WOX4,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AMTR_s00405p00009920 WUS, PGA6, WUS1,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.05 OrthoFinder output from all 47 species
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.03 OrthoFinder output from all 47 species
Aob_g22693 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G009000.1 STIP, HB-3,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G009200.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.27G012000.1 WUS, PGA6, WUS1,... WOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g36553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50892 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009453001 WOX4 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016360001 WOX5 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01018787001 WUS, PGA6, WUS1 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01025075001 WOX3, PRS1, PRS RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
LOC_Os01g62310.1 WOX2, LOC_Os01g62310 transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
LOC_Os05g48990.1 STIP, HB-3,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_10344604g0010 STIP, HB-3, WOX9 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_121643g0010 WOX4 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_42637g0010 WOX2 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_747816g0010 STPL, WOX8 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_8832398g0010 WOX2 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Solyc03g118770.4.1 WOX1, Solyc03g118770 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Solyc04g078650.4.1 WOX4, Solyc04g078650 transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Solyc06g075567.1.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Solyc11g072770.2.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Solyc11g072790.2.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e006644_P002 WUS, PGA6, WUS1,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e009121_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e019245_P001 WOX5, Zm00001e019245 transcription factor (WOX) 0.01 OrthoFinder output from all 47 species
Zm00001e024170_P001 Zm00001e024170 WUSCHEL-related homeobox 3B OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e028720_P001 WOX5, Zm00001e028720 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e028776_P002 WOX2, Zm00001e028776 transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 33 92
No external refs found!