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  5. Gb_29931

Gb_29931


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 222.0)


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29931

Target Alias Description ECC score Gene Family Method Actions
Aev_g10343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24238 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g24711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29144 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g29145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g30561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g30918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g31469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35267 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g35410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48480 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g48749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56892 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene20922.t1 Aspi01Gene20922 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25053.t1 Aspi01Gene25053 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene43084.t1 Aspi01Gene43084 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50918.t1 Aspi01Gene50918 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene60028.t1 Aspi01Gene60028 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g16378 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g32961 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g37695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18112 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g26223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01729 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_06978 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_13701 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_14962 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_15908 ORF120 Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_26878 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_27233 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_29546 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_29919 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Gb_36581 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 OrthoFinder output from all 47 species
Gb_37614 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_39185 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_40853 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 OrthoFinder output from all 47 species
Len_g06736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c26_13990V3.1 Pp3c26_13990 Polynucleotidyl transferase, ribonuclease H-like... 0.03 OrthoFinder output from all 47 species
Ppi_g02511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g38070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 3 91
No external refs found!