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Description : component RPS16 of SSU proteome
Gene families : OG0002224 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002224_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_29914 | |
| Cluster | HCCA: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00161540 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00046p00076360 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | OrthoFinder output from all 47 species | |
| AT2G09990 | No alias | Ribosomal protein S5 domain 2-like superfamily protein | 0.17 | OrthoFinder output from all 47 species | |
| Adi_g074671 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g64161 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g00146 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Aop_g19106 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22405 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0018.g014901 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g68462 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.05G019700.1 | Ceric.05G019700 | component *(uS9) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G055700.1 | Ceric.19G055700 | component *(uS9) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000123.14 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | OrthoFinder output from all 47 species | |
| Cre13.g573351 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.19 | OrthoFinder output from all 47 species | |
| Dac_g12959 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.15 | OrthoFinder output from all 47 species | |
| GSVIVT01017923001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.29 | OrthoFinder output from all 47 species | |
| GSVIVT01031714001 | No alias | 40S ribosomal protein S16-3 OS=Arabidopsis thaliana | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os11g03400.1 | LOC_Os11g03400 | component RPS16 of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os12g03090.1 | LOC_Os12g03090 | component RPS16 of SSU proteome | 0.09 | OrthoFinder output from all 47 species | |
| Len_g13370 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| MA_2656g0010 | No alias | 40S ribosomal protein S16 OS=Gossypium hirsutum... | 0.04 | OrthoFinder output from all 47 species | |
| MA_32670g0010 | No alias | component RPS16 of SSU proteome | 0.19 | OrthoFinder output from all 47 species | |
| Mp1g07720.1 | No alias | component RPS16 of SSU proteome | 0.17 | OrthoFinder output from all 47 species | |
| Mp1g14290.1 | No alias | component RPS16 of SSU proteome | 0.25 | OrthoFinder output from all 47 species | |
| Msp_g41319 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Pp3c19_22410V3.1 | Pp3c19_22410 | Ribosomal protein S5 domain 2-like superfamily protein | 0.14 | OrthoFinder output from all 47 species | |
| Pp3c21_20630V3.1 | Pp3c21_20630 | Ribosomal protein S5 domain 2-like superfamily protein | 0.17 | OrthoFinder output from all 47 species | |
| Pp3c9_4180V3.1 | Pp3c9_4180 | Ribosomal protein S5 domain 2-like superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
| Ppi_g23947 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g33948 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0170.g024366 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19273 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Smo138369 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Solyc01g068530.3.1 | Solyc01g068530 | component RPS16 of SSU proteome | 0.23 | OrthoFinder output from all 47 species | |
| Solyc04g026100.1.1 | Solyc04g026100 | component RPS16 of SSU proteome | 0.23 | OrthoFinder output from all 47 species | |
| Solyc05g005690.1.1 | Solyc05g005690 | component RPS16 of SSU proteome | 0.2 | OrthoFinder output from all 47 species | |
| Spa_g11660 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Tin_g12571 | No alias | component *(uS9) of small ribosomal-subunit (SSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e009230_P001 | Zm00001e009230 | component RPS16 of SSU proteome | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e020865_P003 | Zm00001e020865 | component RPS16 of SSU proteome | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e039245_P001 | Zm00001e039245 | component RPS16 of SSU proteome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |