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Gb_29807


Description : C2 and GRAM domain-containing protein At1g03370 OS=Arabidopsis thaliana (sp|q9zvt9|c2gr1_arath : 1025.0)


Gene families : OG0002452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29807
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00181260 evm_27.TU.AmTr_v1... C2 and GRAM domain-containing protein At1g03370... 0.04 OrthoFinder output from all 47 species
AT1G03370 No alias C2 calcium/lipid-binding and GRAM domain containing protein 0.07 OrthoFinder output from all 47 species
Dac_g16705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os08g38440.1 LOC_Os08g38440 C2 and GRAM domain-containing protein At1g03370... 0.04 OrthoFinder output from all 47 species
Nbi_g13629 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0094.g019154 No alias not classified & original description: CDS=1-3057 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 547 648
IPR000008 C2_dom 2 104
IPR031968 VASt 265 412
IPR031968 VASt 869 1007
IPR004182 GRAM 700 767
No external refs found!