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  5. Gb_29764

Gb_29764


Description : transcription factor (GRAS)


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29764

Target Alias Description ECC score Gene Family Method Actions
AT2G29060 No alias GRAS family transcription factor 0.03 OrthoFinder output from all 47 species
AT3G46600 No alias GRAS family transcription factor 0.09 OrthoFinder output from all 47 species
AT5G59450 No alias GRAS family transcription factor 0.03 OrthoFinder output from all 47 species
Adi_g115872 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06930 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29168 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g32092 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38338 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23035 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26224 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g29384 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Als_g60766 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14981 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21708 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25508 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30977 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30978 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38920 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05451.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05452.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23275.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24617.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32542.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65531.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72628.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72636.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0200.g057510 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: CDS=1-2661 0.03 OrthoFinder output from all 47 species
Azfi_s0210.g058077 No alias GRAS-type transcription factor & original description: CDS=1-2709 0.03 OrthoFinder output from all 47 species
Azfi_s0304.g063850 No alias GRAS-type transcription factor & original description: CDS=1-2073 0.04 OrthoFinder output from all 47 species
Cba_g23067 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72741 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G080800.1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.20G055000.1 Ceric.20G055000 GRAS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g06297 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g10278 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14499 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16966 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18741 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35446 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35554 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45854 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09269 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18847 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10688 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25844 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03966 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15158 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16289 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g31430 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016522001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
GSVIVT01016523001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
GSVIVT01024932001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.07 OrthoFinder output from all 47 species
GSVIVT01024935001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.06 OrthoFinder output from all 47 species
GSVIVT01034155001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.12 OrthoFinder output from all 47 species
LOC_Os03g40080.1 LOC_Os03g40080 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50060.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.05 OrthoFinder output from all 47 species
LOC_Os11g47900.1 LOC_Os11g47900 transcription factor (GRAS) 0.05 OrthoFinder output from all 47 species
LOC_Os12g38490.1 LOC_Os12g38490 transcription factor (GRAS) 0.06 OrthoFinder output from all 47 species
Len_g08381 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g32687 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11143 No alias GRAS-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03724 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08951 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09779 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35888 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40509 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14209 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22771 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g37898 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g65671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21005 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05296 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06907 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62353 No alias GRAS-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g62859 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009546 No alias GRAS-type transcription factor & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020508 No alias GRAS-type transcription factor & original description: CDS=1-399 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020509 No alias GRAS-type transcription factor & original description: CDS=1-1197 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023672 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: CDS=1-1506 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023674 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: CDS=1-2433 0.03 OrthoFinder output from all 47 species
Smo232175 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Solyc05g053090.2.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Solyc06g076280.3.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Spa_g10373 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16511 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17280 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41396 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48684 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49127 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52612 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56681 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46262 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006195_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Zm00001e019317_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.01 OrthoFinder output from all 47 species
Zm00001e020921_P001 Zm00001e020921 transcription factor (GRAS) 0.01 OrthoFinder output from all 47 species
Zm00001e020943_P001 Zm00001e020943 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Zm00001e020944_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 381 752
No external refs found!