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  5. Gb_29041

Gb_29041


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29041

Target Alias Description ECC score Gene Family Method Actions
AT1G57650 No alias ATP binding 0.02 OrthoFinder output from all 47 species
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G66090 No alias Disease resistance protein (TIR-NBS class) 0.02 OrthoFinder output from all 47 species
AT1G72900 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.04 OrthoFinder output from all 47 species
AT1G72930 TIR toll/interleukin-1 receptor-like 0.02 OrthoFinder output from all 47 species
AT3G25505 No alias No description available 0.02 OrthoFinder output from all 47 species
AT3G44400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Adi_g083862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48806.t1 Aspi01Gene48806 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z038400.1 Ceric.1Z038400 not classified & original description: pacid=50622569... 0.03 OrthoFinder output from all 47 species
Ceric.1Z038500.1 Ceric.1Z038500 not classified & original description: pacid=50622568... 0.03 OrthoFinder output from all 47 species
Dac_g43390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019193001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01020983001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os12g31160.1 RPP13, LOC_Os12g31160 no description available(sp|p0do08|pikm2_orysj : 295.0) 0.02 OrthoFinder output from all 47 species
MA_10431791g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10434210g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_11587g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_12346g0030 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_143311g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_172867g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_328671g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_360126g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_516333g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_73017g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Pir_g36302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46217 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49152 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g014840.3.1 Solyc01g014840 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc01g102840.3.1 Solyc01g102840 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 7 182
IPR002182 NB-ARC 194 417
No external refs found!