Gb_28913

Description : no hits & (original description: none)

Gene families : OG0006766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006766_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_28913
Cluster	HCCA: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00268660	evm_27.TU.AmTr_v1...	No description available	0.06	OrthoFinder output from all 47 species
AT2G19870	No alias	tRNA/rRNA methyltransferase (SpoU) family protein	0.06	OrthoFinder output from all 47 species
Adi_g026480	No alias	MRM1-type rRNA methyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g02547	No alias	MRM1-type rRNA methyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03347	No alias	MRM1-type rRNA methyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.1Z044300.1	Ceric.1Z044300	MRM1-type rRNA methyltransferase & original description:...	0.05	OrthoFinder output from all 47 species
Cre13.g566150	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dac_g32801	No alias	MRM1-type rRNA methyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015302001	No alias	No description available	0.08	OrthoFinder output from all 47 species
LOC_Os01g53890.1	LOC_Os01g53890	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
MA_123340g0010	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Ore_g07821	No alias	MRM1-type rRNA methyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e029079_P001	Zm00001e029079	no hits & (original description: none)	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0008173	RNA methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013123	SpoU_subst-bd	224	307
IPR001537	SpoU_MeTrfase	327	450

External Links

No external refs found!

Gb_28913

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation