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  5. Gb_28845

Gb_28845 (ZIP1)


Aliases : ZIP1

Description : metal cation transporter (ZIP)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28845
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00182180 ATIRT1, IRT1,... Solute transport.carrier-mediated transport.ZIP... 0.01 OrthoFinder output from all 47 species
AT2G32270 ZIP3 zinc transporter 3 precursor 0.03 OrthoFinder output from all 47 species
AT5G62160 AtZIP12, ZIP12 zinc transporter 12 precursor 0.03 OrthoFinder output from all 47 species
Als_g00742 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00948 ZIP10 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015884001 ZIP3 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
Gb_06502 ZIP10 metal cation transporter (ZIP) 0.01 OrthoFinder output from all 47 species
Gb_39061 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Gb_39062 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g46470.1 ZIP10, LOC_Os03g46470 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e005195_P002 ZIP10, Zm00001e005195 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 163 317
IPR003689 ZIP 20 133
No external refs found!