1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_28833

Gb_28833


Description : XRN4-exoribonuclease cofactor (LARP1)


Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28833

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00028940 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.03 OrthoFinder output from all 47 species
Adi_g020044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14550 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g16006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G061100.1 Ceric.29G061100 XRN4-exoribonuclease cofactor *(LARP1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g19632 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g46477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006333001 No alias La-related protein 1C OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037494001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 OrthoFinder output from all 47 species
Lfl_g02117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07864 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g44181 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g10955 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g27548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46280 No alias XRN4-exoribonuclease cofactor *(LARP1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006630 La_HTH 434 489
No external refs found!