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  5. Gb_28677

Gb_28677


Description : PYG7 protein involved in PS-I assembly


Gene families : OG0005614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28677
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT1G22700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
Aob_g01175 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Ceric.03G019100.1 Ceric.03G019100 not classified & original description: pacid=50572267... 0.04 OrthoFinder output from all 47 species
Cre12.g524300 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dcu_g08751 No alias protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g13934 No alias protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01034503001 No alias Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
LOC_Os10g32300.1 LOC_Os10g32300 PYG7 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Len_g14837 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
MA_133089g0010 No alias PYG7 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Mp2g07550.1 No alias PYG7 protein involved in PS-I assembly 0.03 OrthoFinder output from all 47 species
Ore_g19021 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016391 No alias protein involved in PS-I assembly *(PYG7) & original... 0.04 OrthoFinder output from all 47 species
Smo90520 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Solyc11g017200.2.1 Solyc11g017200 PYG7 protein involved in PS-I assembly 0.04 OrthoFinder output from all 47 species
Zm00001e034869_P002 Zm00001e034869 PYG7 protein involved in PS-I assembly 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001440 TPR_1 186 217
IPR019734 TPR_repeat 150 181
No external refs found!