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  5. Gb_28674

Gb_28674


Description : Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica (sp|p0c030|rub1_orysj : 127.0)


Gene families : OG0000358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28674
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Aev_g29184 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g23215 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g37888 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g39341 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g39311 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!