1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_28433

Gb_28433 (ATRDRP1, RDR1)


Aliases : ATRDRP1, RDR1

Description : ssRNA polymerase (RDR2)


Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28433

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00039530 ATRDRP1, RDR1,... RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aop_g01841 ATRDRP1, RDR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011643001 ATRDRP1, RDR1 RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011645001 ATRDRP1, RDR1 RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_10435839g0010 ATRDRP1, RDR1 RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10436625g0010 ATRDRP1, RDR1 RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g28892 SMD1, RDR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15139 ATRDRP1, RDR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10447 SDE1, RDR6, SGS2 ssRNA polymerase *(RDR6) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15965 ATRDRP1, RDR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14128 ATRDRP1, RDR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 141 720
No external refs found!