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  5. Gb_28411

Gb_28411 (AtATG18a)


Aliases : AtATG18a

Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28411
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Ceric.10G069800.1 ATG18D,... component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.06 OrthoFinder output from all 47 species
Ceric.1Z168800.1 ATG18D,... component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ceric.28G041900.1 ATG18D,... component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ceric.37G046000.1 AtATG18a, Ceric.37G046000 component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Dcu_g05394 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Dde_g12551 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Len_g01722 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Mp1g05420.1 AtATG18a component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Msp_g44479 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Nbi_g02916 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Nbi_g04808 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Pir_g18881 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Spa_g04557 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Tin_g08166 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 255 280
No external refs found!