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  5. Gb_28365

Gb_28365 (FSD3)


Aliases : FSD3

Description : iron superoxide dismutase. PAP4/FSD3 cofactor of plastid-encoded RNA polymerase


Gene families : OG0002805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28365
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00032580 FSD3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
AT5G23310 FSD3 Fe superoxide dismutase 3 0.09 OrthoFinder output from all 47 species
AT5G51100 FSD2 Fe superoxide dismutase 2 0.09 OrthoFinder output from all 47 species
Ala_g21369 ATFSD1, FSD1 iron superoxide dismutase *(FSD) & original description: none 0.03 OrthoFinder output from all 47 species
Cre10.g436050 ATFSD1, FSD1 Redox homeostasis.enzymatic reactive oxygen species... 0.02 OrthoFinder output from all 47 species
Ehy_g05303 ATFSD1, FSD1 iron superoxide dismutase *(FSD) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013850001 FSD2 RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
GSVIVT01026137001 FSD3 RNA biosynthesis.organelle machineries.RNA polymerase... 0.08 OrthoFinder output from all 47 species
Mp7g14090.1 ATFSD1, FSD1 iron superoxide dismutase 0.03 OrthoFinder output from all 47 species
Ore_g17712 ATFSD1, FSD1 iron superoxide dismutase *(FSD) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g021140.3.1 FSD3, Solyc02g021140 iron superoxide dismutase. PAP4/FSD3 cofactor of... 0.07 OrthoFinder output from all 47 species
Solyc03g095180.3.1 FSD2, Solyc03g095180 iron superoxide dismutase. PAP9/FSD2 cofactor of... 0.06 OrthoFinder output from all 47 species
Tin_g20017 ATFSD1, FSD1 iron superoxide dismutase *(FSD) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036663_P001 FSD2, Zm00001e036663 iron superoxide dismutase 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 43 126
IPR019832 Mn/Fe_SOD_C 135 235
No external refs found!