Aliases : ATPMEPCRF, PMEPCRF
Description : pectin methylesterase
Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_28159 | |
Cluster | HCCA: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00242180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00071p00109420 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
AT1G53840 | PME1, ATPME1 | pectin methylesterase 1 | 0.04 | OrthoFinder output from all 47 species | |
AT3G06830 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | OrthoFinder output from all 47 species | |
AT3G14310 | ATPME3, PME3 | pectin methylesterase 3 | 0.07 | OrthoFinder output from all 47 species | |
AT4G02320 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | OrthoFinder output from all 47 species | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.03 | OrthoFinder output from all 47 species | |
Aev_g06111 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g08266 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g12203 | PME1, ATPME1 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g11030 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g32996 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g19937 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09872 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g61344 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene07382.t1 | Aspi01Gene07382 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene07394.t1 | Aspi01Gene07394 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene10964.t1 | Aspi01Gene10964 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene39882.t1 | Aspi01Gene39882 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene45157.t1 | ATPME2, PME2,... | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0113.g045942 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.01G014900.1 | Ceric.01G014900 | EC_3.1 hydrolase acting on ester bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g21852 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g01562 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g12104 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g13634 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g51187 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Dde_g48560 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g04854 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g15129 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01026518001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01027653001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01035108001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
Gb_24564 | ATPME3, PME3 | pectin methylesterase | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os01g20980.1 | ATPMEPCRB, LOC_Os01g20980 | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g57854.1 | ATPMEPCRA,... | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os02g18650.1 | LOC_Os02g18650 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g29790.1 | ATPMEPCRB, LOC_Os05g29790 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g12410.1 | LOC_Os08g12410 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g34900.1 | LOC_Os08g34900 | pectin methylesterase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os11g07090.1 | LOC_Os11g07090 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g08750.1 | LOC_Os11g08750 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
Len_g35632 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
MA_10436266g0010 | No alias | Pectinesterase 3 OS=Citrus sinensis... | 0.02 | OrthoFinder output from all 47 species | |
MA_177306g0010 | ATPME2, PME2 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
MA_8928694g0010 | No alias | Probable pectinesterase/pectinesterase inhibitor 32... | 0.02 | OrthoFinder output from all 47 species | |
MA_9367g0020 | ATPME2, PME2 | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
Mp8g09330.1 | RHS12 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g19794 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g18600 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Pp3c8_3840V3.1 | Pp3c8_3840 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g07525 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g12664 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0029.g010222 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g06942 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g099950.1.1 | Solyc01g099950 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g014300.2.1 | Solyc02g014300 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g083360.3.1 | ATPMEPCRF,... | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g083870.4.1 | Solyc03g083870 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g064170.3.1 | ATPMEPCRA,... | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g075350.4.1 | Solyc09g075350 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
Spa_g06048 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007917_P002 | Zm00001e007917 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011069_P001 | PME61, Zm00001e011069 | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e017515_P001 | ATPME2, PME2,... | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e026790_P001 | ATPMEPCRB, Zm00001e026790 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
BP | GO:0042545 | cell wall modification | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
BP | GO:0071555 | cell wall organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |