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  5. LOC_Os03g02540

LOC_Os03g02540 (Os03g0116500)


Aliases : Os03g0116500

Description : 30.11.1 signalling.light.COP9 signalosome Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development. FUSCA 6 (FUS6)


Gene families : OG_01_0007049 (Gene family) Phylogenetic Tree(s): OG0007049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g02540
Cluster HCCA cluster: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT3G61140 ATSK31, ATFUS6,... 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.02 Gene family
Cpa|evm.model.tig00021608.5 No alias 30.11.1 signalling.light.COP9 signalosome Represses... 0.01 Gene family
Cre05.g234300 No alias 30.11.1 signalling.light.COP9 signalosome Represses... 0.02 Gene family
GSVIVT01027510001 No alias 30.11.1 signalling.light.COP9 signalosome Represses... 0.02 Gene family
Zm00001d027359 GRMZM2G062210 30.11.1 signalling.light.COP9 signalosome Represses... 0.06 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019585 Rpn7/CSN1 103 277
IPR000717 PCI_dom 293 394
No external refs found!