Gb_28009 (WL4, SnRK3.9, CIPK12, ATWL4)

Aliases : WL4, SnRK3.9, CIPK12, ATWL4

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_28009

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00244280	SnRK3.12, PKS6,...	Protein modification.phosphorylation.CAMK kinase...	0.01	OrthoFinder output from all 47 species
AMTR_s00045p00096970	CIPK1, SnRK3.16,...	Protein modification.phosphorylation.CAMK kinase...	0.03	OrthoFinder output from all 47 species
AT1G30270	SnRK3.23,...	CBL-interacting protein kinase 23	0.03	OrthoFinder output from all 47 species
AT4G24400	ATCIPK8, CIPK8,...	CBL-interacting protein kinase 8	0.03	OrthoFinder output from all 47 species
Adi_g013144	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Adi_g084114	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Adi_g095346	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.01	OrthoFinder output from all 47 species
Ala_g32969	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.01	OrthoFinder output from all 47 species
Als_g19210	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g22382	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g38122	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g48801	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g52274	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aob_g04439	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aob_g05942	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aop_g08330	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aop_g09796	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aop_g18546	ATCIPK8, CIPK8,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Aspi01Gene03541.t1	KIN10, SNRK1.1,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene42277.t1	SnRK3.12, PKS6,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Aspi01Gene44902.t1	SnRK3.12, PKS6,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Aspi01Gene64473.t1	SnRK3.12, PKS6,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g23796	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Cba_g57988	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ceric.05G081700.1	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.33G018700.1	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Dcu_g41142	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dde_g03849	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ehy_g07631	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ehy_g14280	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ehy_g24310	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
GSVIVT01024583001	PKS5, SNRK3.22,...	CBL-interacting serine/threonine-protein kinase 11...	0.06	OrthoFinder output from all 47 species
GSVIVT01034231001	SnRK3.25, CIPK25	CBL-interacting serine/threonine-protein kinase 25...	0.04	OrthoFinder output from all 47 species
Gb_00014	No alias	CBL-interacting protein kinase 5 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os01g10870.1	WL4, SnRK3.9,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
LOC_Os01g55440.1	PKS18, CIPK20,...	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
LOC_Os03g03510.1	SnRK3.12, PKS6,...	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
LOC_Os03g43440.1	SnRK3.3, CIPK4,...	CBL-interacting protein kinase 7 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
Len_g33072	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Len_g56031	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
MA_14540g0020	PKS18, CIPK20, SnRK3.6	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
MA_31203g0010	SnRK3.23,...	SNF1-related protein kinase (SnRK3)	0.06	OrthoFinder output from all 47 species
Nbi_g06216	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ore_g37114	KIN10, SNRK1.1, AKIN10	catalytic subunit alpha of SnRK1 kinase complex &...	0.01	OrthoFinder output from all 47 species
Ppi_g05048	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ppi_g16246	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Solyc06g007440.4.1	PKS5, SNRK3.22,...	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
Solyc06g068450.3.1	SnRK3.25,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Solyc09g018280.1.1	ATSR1, CIPK14,...	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
Solyc12g098910.2.1	CIPK1, SnRK3.16,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Spa_g07755	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Spa_g21102	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Tin_g08053	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Tin_g08537	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Zm00001e019428_P001	CIPK2, SnRK3.2,...	SNF1-related protein kinase (SnRK3)	0.01	OrthoFinder output from all 47 species
Zm00001e034151_P001	SnRK3.25,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Zm00001e037422_P004	SNRK3.11, SOS2,...	SNF1-related protein kinase (SnRK3). protein kinase (SOS2)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004041	NAF_dom	313	372
IPR000719	Prot_kinase_dom	13	266

External Links

No external refs found!

Gb_28009 (WL4, SnRK3.9, CIPK12, ATWL4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation