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  5. Gb_28004

Gb_28004 (PIR1, MAP1, AUX1, WAV5)


Aliases : PIR1, MAP1, AUX1, WAV5

Description : auxin transporter (AUX/LAX)


Gene families : OG0000450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28004

Target Alias Description ECC score Gene Family Method Actions
Als_g33370 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g63770.1 PIR1, MAP1,... auxin transporter (AUX/LAX) 0.04 OrthoFinder output from all 47 species
LOC_Os11g06820.1 LAX3, LOC_Os11g06820 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
Msp_g48312 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Smo127494 LAX1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc01g111310.3.1 LAX2, Solyc01g111310 auxin transporter (AUX/LAX) 0.05 OrthoFinder output from all 47 species
Solyc10g055260.2.1 LAX2, Solyc10g055260 auxin transporter (AUX/LAX) 0.04 OrthoFinder output from all 47 species
Zm00001e001017_P003 LAX2, Zm00001e001017 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
Zm00001e019235_P001 LAX1, Zm00001e019235 auxin transporter (AUX/LAX) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 53 441
No external refs found!