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  5. Gb_27995

Gb_27995 (CHUP1)


Aliases : CHUP1

Description : motility factor (CHUP)


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27995
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00070270 CHUP1,... Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.07 OrthoFinder output from all 47 species
AT3G25690 CHUP1 Hydroxyproline-rich glycoprotein family protein 0.06 OrthoFinder output from all 47 species
Aev_g05522 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28443 CHUP1 motility factor *(CHUP) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g13466 CHUP1 motility factor *(CHUP) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g22592 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05340 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046122 CHUP1 motility factor *(CHUP) & original description: CDS=88-3033 0.04 OrthoFinder output from all 47 species
Ceric.25G018000.1 CHUP1, Ceric.25G018000 motility factor *(CHUP) & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g36487 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48663 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008227001 CHUP1 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01011966001 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.1 OrthoFinder output from all 47 species
LOC_Os11g01439.1 CHUP1, LOC_Os11g01439 motility factor (CHUP) 0.06 OrthoFinder output from all 47 species
LOC_Os12g01449.1 CHUP1, LOC_Os12g01449 motility factor (CHUP) 0.04 OrthoFinder output from all 47 species
Lfl_g04239 CHUP1 motility factor *(CHUP) & original description: none 0.07 OrthoFinder output from all 47 species
MA_10436831g0010 CHUP1 motility factor (CHUP) 0.04 OrthoFinder output from all 47 species
Msp_g15601 CHUP1 motility factor *(CHUP) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27545 CHUP1 motility factor *(CHUP) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g17440 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30546 CHUP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12610 CHUP1 motility factor *(CHUP) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02408 CHUP1 motility factor *(CHUP) & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g09064 No alias motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Smo438117 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.05 OrthoFinder output from all 47 species
Smo438203 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.03 OrthoFinder output from all 47 species
Solyc05g009930.3.1 CHUP1, Solyc05g009930 motility factor (CHUP) 0.05 OrthoFinder output from all 47 species
Spa_g09352 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21079 CHUP1 motility factor *(CHUP) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e032505_P001 CHUP1, Zm00001e032505 motility factor (CHUP) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!