Description : RNA editing factor (POCO)
Gene families : OG0000613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000613_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00095p00019470 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g80270,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00095p00027730 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g80270,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00135p00094680 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g27460... | 0.01 | OrthoFinder output from all 47 species | |
AT1G02370 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
AT1G60770 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
AT1G80270 | PPR596 | PENTATRICOPEPTIDE REPEAT 596 | 0.07 | OrthoFinder output from all 47 species | |
AT4G01990 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT4G02820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
Aob_g02151 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g09907 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g11231 | No alias | RNA editing factor *(POCO) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ceric.17G065300.1 | Ceric.17G065300 | RNA editing factor *(POCO) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.31G052700.1 | Ceric.31G052700 | RNA editing factor *(POCO) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g08858 | No alias | RNA editing factor *(POCO) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g14866 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01002065001 | No alias | Pentatricopeptide repeat-containing protein At4g21705,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01006654001 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.1 | OrthoFinder output from all 47 species | |
GSVIVT01020533001 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01020534001 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01031246001 | No alias | Pentatricopeptide repeat-containing protein At4g01990,... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01033642001 | No alias | Pentatricopeptide repeat-containing protein At1g80270,... | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os01g17320.1 | PPR596, LOC_Os01g17320 | RNA editing factor (POCO) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g19490.1 | LOC_Os01g19490 | Pentatricopeptide repeat-containing protein At4g01990,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g55310.1 | LOC_Os02g55310 | Pentatricopeptide repeat-containing protein At5g27460... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os04g25410.1 | LOC_Os04g25410 | Pentatricopeptide repeat-containing protein At1g60770... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g46010.1 | LOC_Os04g46010 | Pentatricopeptide repeat-containing protein At1g02150... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g12140.1 | LOC_Os07g12140 | RNA editing factor (POCO) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os07g40750.1 | LOC_Os07g40750 | Pentatricopeptide repeat-containing protein At4g21705,... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g35750.1 | LOC_Os10g35750 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g35760.2 | LOC_Os10g35760 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g07260.1 | PPR596, LOC_Os12g07260 | RNA editing factor (POCO) | 0.1 | OrthoFinder output from all 47 species | |
Lfl_g17918 | No alias | RNA editing factor *(POCO) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Lfl_g39062 | No alias | RNA editing factor *(POCO) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
MA_100637g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
MA_10431989g0010 | No alias | RNA editing factor (POCO) | 0.03 | OrthoFinder output from all 47 species | |
MA_128872g0020 | No alias | Pentatricopeptide repeat-containing protein At1g02150... | 0.02 | OrthoFinder output from all 47 species | |
MA_492314g0010 | No alias | RNA editing factor (POCO) | 0.06 | OrthoFinder output from all 47 species | |
MA_58210g0010 | No alias | RNA editing factor (POCO) | 0.02 | OrthoFinder output from all 47 species | |
MA_7558g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.09 | OrthoFinder output from all 47 species | |
MA_94340g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g25474 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g18305 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g14181 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g25307 | PPR596 | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo406783 | PPR596 | Pentatricopeptide repeat-containing protein At1g80270,... | 0.03 | OrthoFinder output from all 47 species | |
Smo416459 | No alias | Pentatricopeptide repeat-containing protein At1g80270,... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g079320.4.1 | Solyc01g079320 | Pentatricopeptide repeat-containing protein At1g02370,... | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g100580.3.1 | Solyc01g100580 | Pentatricopeptide repeat-containing protein At4g01990,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g078330.3.1 | Solyc02g078330 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g005140.3.1 | Solyc06g005140 | Pentatricopeptide repeat-containing protein At4g02820,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g063220.4.1 | Solyc07g063220 | Pentatricopeptide repeat-containing protein At4g21705,... | 0.06 | OrthoFinder output from all 47 species | |
Solyc11g006380.2.1 | Solyc11g006380 | Pentatricopeptide repeat-containing protein At1g60770... | 0.07 | OrthoFinder output from all 47 species | |
Solyc12g020050.2.1 | PPR596, Solyc12g020050 | RNA editing factor (POCO) | 0.07 | OrthoFinder output from all 47 species | |
Spa_g10362 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g11271 | No alias | RNA editing factor *(POCO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g37476 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e007372_P001 | Zm00001e007372 | Pentatricopeptide repeat-containing protein At1g02150... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012594_P001 | Zm00001e012594 | Pentatricopeptide repeat-containing protein At4g21705,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e017396_P001 | PPR596, Zm00001e017396 | RNA editing factor (POCO) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025470_P001 | PPR596, Zm00001e025470 | RNA editing factor (POCO) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026211_P002 | Zm00001e026211 | Pentatricopeptide repeat-containing protein At1g02370,... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e036620_P001 | Zm00001e036620 | Pentatricopeptide repeat-containing protein At1g60770... | 0.1 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
No external refs found! |