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  5. Gb_27797

Gb_27797 (OTP84)


Aliases : OTP84

Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 680.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27797

Target Alias Description ECC score Gene Family Method Actions
Gb_11925 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_13100 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_21442 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_26340 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.07 OrthoFinder output from all 47 species
MA_10429540g0020 LOI1, MEF11 Pentatricopeptide repeat-containing protein At4g14850... 0.08 OrthoFinder output from all 47 species
MA_10430171g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_18277g0010 CRR22 Pentatricopeptide repeat-containing protein At4g39530... 0.04 OrthoFinder output from all 47 species
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 451 483
IPR002885 Pentatricopeptide_repeat 157 185
IPR002885 Pentatricopeptide_repeat 663 688
IPR002885 Pentatricopeptide_repeat 563 587
IPR002885 Pentatricopeptide_repeat 129 154
IPR002885 Pentatricopeptide_repeat 590 619
IPR032867 DYW_dom 862 986
IPR002885 Pentatricopeptide_repeat 689 736
IPR002885 Pentatricopeptide_repeat 285 332
IPR002885 Pentatricopeptide_repeat 488 534
IPR002885 Pentatricopeptide_repeat 386 433
IPR002885 Pentatricopeptide_repeat 186 232
No external refs found!