Gb_27666


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 133.0)


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27666

Target Alias Description ECC score Gene Family Method Actions
Adi_g000192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g006616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040367 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g041199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044521 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g046450 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g048574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g073469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13859 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00919 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g10157 ORF120 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12063 ORF120 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22968.t1 Aspi01Gene22968 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27813.t1 Aspi01Gene27813 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32979.t1 Aspi01Gene32979 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59054.t1 ORF120, Aspi01Gene59054 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63791.t1 Aspi01Gene63791 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g23091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37695 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g38793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60058 ORF120 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g69036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77105 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30181 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g41075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g20048 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024357001 ATMYB64, ATMYB92, MYB92 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_00288 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_01729 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_04010 ORF170 Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_05523 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_06223 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_06978 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.08 OrthoFinder output from all 47 species
Gb_09514 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_10177 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_13320 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_13962 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_14301 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_15908 ORF120 Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_21118 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_21518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_23548 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_24597 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_25092 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Gb_26878 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_27233 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_28316 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species
Gb_29350 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_30261 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_30314 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_30317 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_33365 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_33444 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 OrthoFinder output from all 47 species
Gb_34085 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_36581 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_37614 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_38048 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 OrthoFinder output from all 47 species
Gb_40566 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 OrthoFinder output from all 47 species
Len_g09318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g27574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12630 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12768 ORF145A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426277g0030 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Msp_g46637 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g28388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04307 ORF145A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18328 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27459 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32207 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g33806 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_980V3.1 Pp3c14_980 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c16_3110V3.1 Pp3c16_3110 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g13439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g47996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54771 ORF120 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 125 176
No external refs found!