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  5. Gb_27516

Gb_27516


Description : COP1-interactive protein 1 OS=Arabidopsis thaliana (sp|f4jzy1|cip1_arath : 197.0)


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27516

Target Alias Description ECC score Gene Family Method Actions
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.05 OrthoFinder output from all 47 species
AT5G41140 No alias Myosin heavy chain-related protein 0.07 OrthoFinder output from all 47 species
Adi_g011579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01019782001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g39950.1 LOC_Os10g39950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437003g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g06501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025686 No alias not classified & original description: CDS=1028-3349 0.03 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g04859 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 11 138
No external refs found!