1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_27494

Gb_27494 (AtMYB20, MYB20)


Aliases : AtMYB20, MYB20

Description : Transcription factor MYB20 OS=Arabidopsis thaliana (sp|q9c7u7|myb20_arath : 93.6)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27494

Target Alias Description ECC score Gene Family Method Actions
AT1G66230 AtMYB20, MYB20 myb domain protein 20 0.07 OrthoFinder output from all 47 species
AT2G31180 ATMYB14, MYB14, MYB14AT myb domain protein 14 0.05 OrthoFinder output from all 47 species
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.01 OrthoFinder output from all 47 species
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.02 OrthoFinder output from all 47 species
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.01 OrthoFinder output from all 47 species
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.01 OrthoFinder output from all 47 species
Als_g07622 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49183 ATMYB46, MYB46 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g75895 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g04810 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003662001 ATMYB102, ATM4, MYB102 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01017716001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01027811001 ATMYB15, ATY19, MYB15 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01030866001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.09 OrthoFinder output from all 47 species
LOC_Os01g36460.1 MYB86, ATMYB86,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
LOC_Os07g43580.1 MYB30, ATMYB30,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g24800.1 ATMYB94,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
MA_117992g0010 AtMYB112, MYB112 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_437179g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_95339g0010 AtMYB79, MYB79 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_9818613g0010 MYB3, ATMYB3 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Mp3g23170.1 MYB103,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Pir_g31100 MYB6, AtMYB6 MYB class-R2R3 transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32326 ATMYB4, MYB4 MYB class-R2R3 subgroup-4 transcription factor &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006431 MYB103,... not classified & original description: CDS=563-862 0.01 OrthoFinder output from all 47 species
Solyc02g079280.3.1 ATMYB102, ATM4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc02g086690.3.1 MYB24, AtMYB24,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc02g093740.3.1 AtMYB40, MYB40,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc05g014290.4.1 AtMYB40, MYB40,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc06g074910.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc10g055410.2.1 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e010995_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e015239_P001 AtMYB17, MYB17,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e034214_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Zm00001e035619_P002 MYB30, ATMYB30,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 6 30
No external refs found!