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  5. Gb_27395

Gb_27395


Description : component ARPF2 of ARPF2-ARRS1 complex


Gene families : OG0006885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27395
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00132130 evm_27.TU.AmTr_v1... Ribosome production factor 2 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT3G23620 No alias Ribosomal RNA processing Brix domain protein 0.05 OrthoFinder output from all 47 species
Azfi_s0388.g067595 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.01G026800.1 Ceric.01G026800 component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Cre03.g197000 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Ehy_g06742 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01033782001 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os01g33030.1 LOC_Os01g33030 component ARPF2 of ARPF2-ARRS1 complex 0.03 OrthoFinder output from all 47 species
MA_89741g0010 No alias component ARPF2 of ARPF2-ARRS1 complex 0.05 OrthoFinder output from all 47 species
Mp4g01500.1 No alias component ARPF2 of ARPF2-ARRS1 complex 0.04 OrthoFinder output from all 47 species
Pp3c4_19370V3.1 Pp3c4_19370 Ribosomal RNA processing Brix domain protein 0.01 OrthoFinder output from all 47 species
Sam_g11434 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.04 OrthoFinder output from all 47 species
Smo73689 No alias Ribosome production factor 2 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc10g083600.2.1 Solyc10g083600 component ARPF2 of ARPF2-ARRS1 complex 0.1 OrthoFinder output from all 47 species
Zm00001e032080_P001 Zm00001e032080 component ARPF2 of ARPF2-ARRS1 complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007109 Brix 35 233
No external refs found!