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  5. Gb_27126

Gb_27126


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27126
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT5G51630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Adi_g083862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03492 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_08632 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_12483 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Gb_20301 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_23545 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
LOC_Os12g31160.1 RPP13, LOC_Os12g31160 no description available(sp|p0do08|pikm2_orysj : 295.0) 0.02 OrthoFinder output from all 47 species
MA_123242g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_75103g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Pir_g20725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38153 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46217 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_20790V3.1 Pp3c10_20790 disease resistance protein (TIR-NBS-LRR class) 0.01 OrthoFinder output from all 47 species
Pp3c16_21740V3.1 Pp3c16_21740 No annotation 0.02 OrthoFinder output from all 47 species
Solyc02g082050.3.1 Solyc02g082050 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc07g063360.1.1 Solyc07g063360 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Zm00001e035278_P001 Zm00001e035278 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 160 378
IPR000157 TIR_dom 3 147
No external refs found!