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  5. Gb_26694

Gb_26694 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana (sp|q9zuw3|pp172_arath : 654.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26694
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AT4G33990 EMB2758 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g085203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031292001 No alias Pentatricopeptide repeat-containing protein At1g56690,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_00201 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_00204 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_04446 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_04616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_07872 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_08863 CRR22 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_11221 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_12004 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_13369 No alias RNA editing factor (MEF12) 0.05 OrthoFinder output from all 47 species
Gb_17094 CRR22 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_23083 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_24928 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Gb_26154 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.05 OrthoFinder output from all 47 species
Gb_27322 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_27377 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 OrthoFinder output from all 47 species
Gb_32983 No alias Pentatricopeptide repeat-containing protein At3g49710... 0.05 OrthoFinder output from all 47 species
Gb_34236 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Gb_34779 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
Gb_34816 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_36676 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_40436 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
LOC_Os06g41040.1 LOC_Os06g41040 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428121g0010 REME1 Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
MA_10428421g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_13057g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_20899g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_210089g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_217g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_230261g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
MA_33151g0010 OTP86 Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species
MA_35442g0010 No alias RNA editing factor (SLO2) 0.03 OrthoFinder output from all 47 species
MA_392600g0010 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
MA_519985g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_5481g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_632994g0010 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.05 OrthoFinder output from all 47 species
MA_68718g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_733561g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_8319g0010 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Pir_g35608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo17005 PDE247, CLB19 Pentatricopeptide repeat-containing protein At2g17210... 0.04 OrthoFinder output from all 47 species
Spa_g29031 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 715 839
IPR002885 Pentatricopeptide_repeat 617 640
IPR002885 Pentatricopeptide_repeat 688 711
IPR002885 Pentatricopeptide_repeat 137 185
IPR002885 Pentatricopeptide_repeat 441 488
IPR002885 Pentatricopeptide_repeat 239 286
IPR002885 Pentatricopeptide_repeat 542 589
IPR002885 Pentatricopeptide_repeat 340 387
No external refs found!