Description : Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana (sp|q9ssr4|ppr77_arath : 574.0)
Gene families : OG0016007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016007_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00104p00122950 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g52620... | 0.05 | OrthoFinder output from all 47 species | |
AT1G52620 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01017297001 | No alias | Pentatricopeptide repeat-containing protein At1g52620... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os11g04295.1 | LOC_Os11g04295 | Pentatricopeptide repeat-containing protein At1g52620... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g116560.1.1 | Solyc03g116560 | Pentatricopeptide repeat-containing protein At1g52620... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024077_P001 | Zm00001e024077 | Pentatricopeptide repeat-containing protein At1g52620... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 172 | 198 |
IPR002885 | Pentatricopeptide_repeat | 513 | 545 |
IPR002885 | Pentatricopeptide_repeat | 338 | 371 |
IPR002885 | Pentatricopeptide_repeat | 622 | 671 |
IPR002885 | Pentatricopeptide_repeat | 377 | 426 |
IPR002885 | Pentatricopeptide_repeat | 272 | 321 |
IPR002885 | Pentatricopeptide_repeat | 737 | 785 |
IPR002885 | Pentatricopeptide_repeat | 201 | 251 |
IPR002885 | Pentatricopeptide_repeat | 447 | 496 |
IPR002885 | Pentatricopeptide_repeat | 552 | 601 |
No external refs found! |