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  5. Gb_26482

Gb_26482


Description : Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana (sp|q9c7a2|itn1_arath : 123.0)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26482

Target Alias Description ECC score Gene Family Method Actions
AT4G03450 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
AT4G03480 No alias Ankyrin repeat family protein 0.05 OrthoFinder output from all 47 species
AT4G03490 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G14400 ACD6 ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01010731001 No alias Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
GSVIVT01020524001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030363001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os09g15370.1 LOC_Os09g15370 Ankyrin repeat-containing protein At2g01680... 0.02 OrthoFinder output from all 47 species
LOC_Os11g14570.1 LOC_Os11g14570 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os11g14630.1 LOC_Os11g14630 Ankyrin repeat-containing protein At2g01680... 0.02 OrthoFinder output from all 47 species
LOC_Os11g15460.1 LOC_Os11g15460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g055970.4.1 Solyc05g055970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g061740.4.1 Solyc07g061740 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
Zm00001e031178_P002 Zm00001e031178 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 208 270
IPR020683 DUF3447 5 92
IPR020683 DUF3447 139 197
IPR026961 PGG_dom 370 475
No external refs found!