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  5. Gb_26322

Gb_26322 (SET29, SDG29, ATX5)


Aliases : SET29, SDG29, ATX5

Description : Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana (sp|p0cb22|atx2_arath : 164.0)


Gene families : OG0006147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26322

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00150780 ATX1, SDG27,... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g21981 SDG30, ATX2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g37430 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g42221 ATX4, SDG16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29506 ATX4, SDG16 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene11060.t1 ATX3, SDG14,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11062.t1 Aspi01Gene11062 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0215.g058370 SDG30, ATX2 not classified & original description: CDS=559-6048 0.06 OrthoFinder output from all 47 species
Dcu_g37518 SDG30, ATX2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g49218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436998g0010 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10436998g0020 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Mp1g26800.1 SDG30, ATX2 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g15718 SDG30, ATX2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29454 ATX1, SDG27 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo424372 No alias Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g22206 SDG30, ATX2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 2251 2358
IPR032308 TDBD 292 325
No external refs found!