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  5. Gb_26310

Gb_26310 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 549.0)


Gene families : OG0064058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26310
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
MA_10433549g0010 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 610 656
IPR002885 Pentatricopeptide_repeat 711 759
IPR002885 Pentatricopeptide_repeat 182 230
IPR002885 Pentatricopeptide_repeat 284 331
IPR002885 Pentatricopeptide_repeat 446 494
IPR002885 Pentatricopeptide_repeat 785 809
IPR002885 Pentatricopeptide_repeat 359 386
IPR002885 Pentatricopeptide_repeat 550 579
IPR002885 Pentatricopeptide_repeat 258 283
IPR002885 Pentatricopeptide_repeat 93 114
IPR002885 Pentatricopeptide_repeat 387 417
IPR002885 Pentatricopeptide_repeat 522 548
No external refs found!