Gb_26269


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 95.9)


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26269

Target Alias Description ECC score Gene Family Method Actions
Adi_g009380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g042541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g042855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g042897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g073088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g082110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10343 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g14711 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20454 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g20743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g24238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24711 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g24902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g25032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g28806 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g29144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30379 ORF120 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g30918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g31116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g31469 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g32323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g35523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g38075 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g39312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g41008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g41447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g41986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g43097 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g43360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g49544 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g49549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43236 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g39287 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g56892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02963.t1 Aspi01Gene02963 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03042.t1 ORF120, Aspi01Gene03042 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03618.t1 Aspi01Gene03618 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04516.t1 Aspi01Gene04516 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05115.t1 Aspi01Gene05115 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06338.t1 Aspi01Gene06338 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07148.t1 ORF120, Aspi01Gene07148 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08988.t1 Aspi01Gene08988 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10881.t1 Aspi01Gene10881 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13677.t1 ORF120, Aspi01Gene13677 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17598.t1 ORF120, Aspi01Gene17598 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20922.t1 Aspi01Gene20922 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene22882.t1 ORF120, Aspi01Gene22882 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25053.t1 Aspi01Gene25053 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene26952.t1 ORF240B, Aspi01Gene26952 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28291.t1 Aspi01Gene28291 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29405.t1 Aspi01Gene29405 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31147.t1 Aspi01Gene31147 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32979.t1 Aspi01Gene32979 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33380.t1 Aspi01Gene33380 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34505.t1 Aspi01Gene34505 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38145.t1 Aspi01Gene38145 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38567.t1 Aspi01Gene38567 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39004.t1 Aspi01Gene39004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51841.t1 Aspi01Gene51841 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56449.t1 ORF120, Aspi01Gene56449 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59054.t1 ORF120, Aspi01Gene59054 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene60028.t1 Aspi01Gene60028 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60183.t1 Aspi01Gene60183 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67798.t1 Aspi01Gene67798 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68413.t1 Aspi01Gene68413 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32007 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g32930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g70677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G078900.1 Ceric.18G078900 not classified & original description: pacid=50621464... 0.05 OrthoFinder output from all 47 species
Ceric.19G041700.1 Ceric.19G041700 not classified & original description: pacid=50576066... 0.04 OrthoFinder output from all 47 species
Ceric.22G064900.1 Ceric.22G064900 not classified & original description: pacid=50615421... 0.05 OrthoFinder output from all 47 species
Ceric.26G005100.1 Ceric.26G005100 not classified & original description: pacid=50599438... 0.03 OrthoFinder output from all 47 species
Dac_g11682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16402 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29078 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06978 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_08666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_22057 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_25323 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_27233 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_29546 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_33444 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_36581 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_39221 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_40853 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Len_g26907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30200 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g45570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43851 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c20_3370V3.1 Pp3c20_3370 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c26_13990V3.1 Pp3c26_13990 Polynucleotidyl transferase, ribonuclease H-like... 0.02 OrthoFinder output from all 47 species
Ppi_g13438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16309 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 135 186
No external refs found!