1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_26190

Gb_26190


Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana (sp|q9asp6|hnrpq_arath : 148.0)


Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00175460 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00041p00082900 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g068963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31132.t2 Aspi01Gene31132 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0096.g043689 No alias not classified & original description: CDS=187-2775 0.05 OrthoFinder output from all 47 species
Cba_g13057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G058800.1 Ceric.04G058800 not classified & original description: pacid=50631350... 0.03 OrthoFinder output from all 47 species
Ceric.20G007500.1 Ceric.20G007500 not classified & original description: pacid=50566839... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.20 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g01827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015774001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01018314001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g10424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436637g0030 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_169053g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8142g0020 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_92056g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g31567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48146 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16078 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25435 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g062290.2.1 Solyc02g062290 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc10g062340.2.1 Solyc10g062340 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g15243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08252 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12919 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 384 450
IPR000504 RRM_dom 481 546
IPR000504 RRM_dom 304 371
No external refs found!