Gb_26182 (ATGMII, GMII)

Aliases : ATGMII, GMII

Description : class-II alpha-mannosidase II

Gene families : OG0006312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006312_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_26182

Target	Alias	Description	ECC score	Gene Family Method
AT5G14950	ATGMII, GMII	golgi alpha-mannosidase II	0.03	OrthoFinder output from all 47 species
Azfi_s0487.g073481	ATGMII, GMII	EC_3.2 glycosylase & original description: CDS=10-3603	0.03	OrthoFinder output from all 47 species
Dcu_g02005	ATGMII, GMII	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01032586001	ATGMII, GMII	Protein modification.N-linked glycosylation.complex...	0.06	OrthoFinder output from all 47 species
MA_201039g0010	ATGMII, GMII	class-II alpha-mannosidase II	0.05	OrthoFinder output from all 47 species
Pnu_g10470	ATGMII, GMII	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004559	alpha-mannosidase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006013	mannose metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0015923	mannosidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000602	Glyco_hydro_38_N	131	468
IPR011682	Glyco_hydro_38_C	735	945
IPR015341	Glyco_hydro_38_cen	474	576

External Links

No external refs found!