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Description : histone (H2A)
Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_25942 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G08880 | GAMMA-H2AX,... | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005118 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30450 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G046500.1 | HTA7, Ceric.06G046500 | histone *(H2A) & original description: pacid=50619602... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.25G059300.1 | GAMMA-H2AX,... | histone *(H2A) & original description: pacid=50594046... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G068500.1 | GAMMA-H2AX,... | histone *(H2A) & original description: pacid=50597336... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G036600.1 | HTA7, Ceric.37G036600 | histone *(H2A) & original description: pacid=50616072... | 0.04 | OrthoFinder output from all 47 species | |
| Cre06.g264750 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g264950 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g265350 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g266700 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g268050 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g268300 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g271350 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g273900 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g274200 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g274800 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g275850 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g276500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g276950 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g504500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g504750 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g505550 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g506250 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre13.g570100 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g708550 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g709200 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g710400 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g711700 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g713400 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g714500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06372 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11405 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014580001 | No alias | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031123001 | HTA7 | Chromatin organisation.histones.H2A-type histone | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g17100.1 | HTA12, LOC_Os03g17100 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g02525 | RAT5, HTA1, ATHTA1 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03532 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g05644 | RAT5, HTA1, ATHTA1 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g26088 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g55104 | HTA6 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40852 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_169054g0020 | HTA10 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| MA_962778g0010 | HTA7 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g06768 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g37655 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c5_1791V3.1 | HTA10, Pp3c5_1791 | histone H2A 10 | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c5_1800V3.1 | HTA10, Pp3c5_1800 | histone H2A 10 | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g10764 | No alias | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g29426 | No alias | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo170948 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g084430.4.1 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g074300.1.1 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g005270.2.1 | HTA10, Solyc12g005270 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00073 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g03104 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g03522 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03017 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010515_P001 | HTA2, Zm00001e010515 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010516_P001 | RAT5, HTA1,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012144_P001 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034815_P001 | HTA12, Zm00001e034815 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035183_P002 | RAT5, HTA1,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |