Gb_25799

Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum (sp|q7xa40|rga3_solbu : 273.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_25799

Target	Alias	Description	ECC score	Gene Family Method
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT1G59780	No alias	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT3G50950	ZAR1	HOPZ-ACTIVATED RESISTANCE 1	0.03	OrthoFinder output from all 47 species
Aob_g22709	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01026747001	No alias	Putative disease resistance protein At1g50180...	0.02	OrthoFinder output from all 47 species
Gb_25815	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.02	OrthoFinder output from all 47 species
LOC_Os04g14220.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os09g09750.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os11g12340.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os11g12350.1	LOC_Os11g12350	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc04g009240.2.1	RPP13, Solyc04g009240	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc04g009690.2.1	RPP13, Solyc04g009690	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041118	Rx_N	6	85
IPR001611	Leu-rich_rpt	514	574
IPR002182	NB-ARC	135	372

External Links

No external refs found!