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  5. Gb_25709

Gb_25709


Description : transcription factor (GRAS). component NSP2 of NSP1-NSP2 nodulation initiation complex


Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25709
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Adi_g055203 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080255 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Als_g14754 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.01 OrthoFinder output from all 47 species
Aob_g09046 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.06 OrthoFinder output from all 47 species
Aop_g05346 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015002 No alias GRAS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.18G071500.1 Ceric.18G071500 component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Len_g31597 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.01 OrthoFinder output from all 47 species
Lfl_g04942 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Msp_g13409 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.01 OrthoFinder output from all 47 species
Msp_g15867 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.01 OrthoFinder output from all 47 species
Ore_g09457 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ore_g30474 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.01 OrthoFinder output from all 47 species
Pnu_g24950 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.01 OrthoFinder output from all 47 species
Tin_g10282 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 278 636
No external refs found!