1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_25549

Gb_25549


Description : histone (H2B)


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25549

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00085300 HTB4,... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00088340 HTB4,... Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
AT3G46030 HTB11 Histone superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g032961 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g008911 HTB4 histone *(H2B) & original description: CDS=50-517 0.04 OrthoFinder output from all 47 species
Ceric.03G007900.1 HTB4, Ceric.03G007900 histone *(H2B) & original description: pacid=50571513... 0.05 OrthoFinder output from all 47 species
Ceric.18G011100.1 HTB4, Ceric.18G011100 histone *(H2B) & original description: pacid=50622059... 0.09 OrthoFinder output from all 47 species
Ceric.20G039500.1 HTB4, Ceric.20G039500 histone *(H2B) & original description: pacid=50566293... 0.08 OrthoFinder output from all 47 species
Ceric.24G053100.1 HTB4, Ceric.24G053100 histone *(H2B) & original description: pacid=50628870... 0.1 OrthoFinder output from all 47 species
Ceric.27G029200.1 Ceric.27G029200 histone *(H2B) & original description: pacid=50606171... 0.05 OrthoFinder output from all 47 species
Ceric.29G085900.1 HTB4, Ceric.29G085900 histone *(H2B) & original description: pacid=50624351... 0.07 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g271376 HTB4 Chromatin organisation.histones.H2B-type histone 0.1 OrthoFinder output from all 47 species
Cre06.g273850 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274250 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g275800 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
Cre12.g504700 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g506200 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g713450 HTB4 Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Dac_g17045 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06359 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
GSVIVT01025021001 No alias Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
GSVIVT01025025001 No alias Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
Gb_41617 HTB11 histone (H2B) 0.04 OrthoFinder output from all 47 species
LOC_Os01g05900.1 HTB11, LOC_Os01g05900 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.06 OrthoFinder output from all 47 species
LOC_Os08g38300.1 HTB11, LOC_Os08g38300 histone (H2B) 0.04 OrthoFinder output from all 47 species
Len_g06996 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13876 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435143g0010 No alias histone (H2B) 0.06 OrthoFinder output from all 47 species
MA_454575g0010 HTB4 histone (H2B) 0.05 OrthoFinder output from all 47 species
MA_6078786g0010 HTB11 histone (H2B) 0.05 OrthoFinder output from all 47 species
Mp6g07010.1 HTB4 histone (H2B) 0.01 OrthoFinder output from all 47 species
Msp_g35793 No alias histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c14_21050V3.1 HTB4, Pp3c14_21050 Histone superfamily protein 0.09 OrthoFinder output from all 47 species
Pp3c6_27740V3.1 HTB4, Pp3c6_27740 Histone superfamily protein 0.05 OrthoFinder output from all 47 species
Sam_g34350 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37866 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37867 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Smo7113 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Solyc02g038690.1.1 HTB4, Solyc02g038690 histone (H2B) 0.05 OrthoFinder output from all 47 species
Solyc03g071620.2.1 Solyc03g071620 histone (H2B) 0.05 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.06 OrthoFinder output from all 47 species
Solyc06g074780.1.1 HTB4, Solyc06g074780 histone (H2B) 0.06 OrthoFinder output from all 47 species
Solyc06g074790.2.1 HTB11, Solyc06g074790 histone (H2B) 0.05 OrthoFinder output from all 47 species
Solyc06g075800.1.1 HTB11, Solyc06g075800 histone (H2B) 0.02 OrthoFinder output from all 47 species
Solyc11g007920.1.1 HTB11, Solyc11g007920 histone (H2B) 0.04 OrthoFinder output from all 47 species
Solyc11g007930.1.1 HTB11, Solyc11g007930 histone (H2B) 0.05 OrthoFinder output from all 47 species
Solyc11g066430.2.1 Solyc11g066430 histone (H2B) 0.05 OrthoFinder output from all 47 species
Solyc12g013510.1.1 HTB11, Solyc12g013510 histone (H2B) 0.11 OrthoFinder output from all 47 species
Spa_g01863 No alias histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g32990 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46015 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50701 No alias histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g52507 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004028_P001 HTB11, Zm00001e004028 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e009857_P001 HTB11, Zm00001e009857 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e016882_P001 HTB2, H2B, Zm00001e016882 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e019346_P001 HTB4, Zm00001e019346 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e023342_P001 HTB4, Zm00001e023342 histone (H2B) 0.06 OrthoFinder output from all 47 species
Zm00001e034226_P001 HTB11, Zm00001e034226 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e039057_P002 HTB11, Zm00001e039057 histone (H2B) 0.02 OrthoFinder output from all 47 species
Zm00001e041296_P001 HTB11, Zm00001e041296 histone (H2B) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 5 116
No external refs found!