Gb_25295 (VLN4, ATVLN4)


Aliases : VLN4, ATVLN4

Description : villin actin-crosslinking factor


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00248490 ATVLN2, VLN2,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
AT4G30160 VLN4, ATVLN4 villin 4 0.04 OrthoFinder output from all 47 species
Aev_g12597 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12394 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20997 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40168 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38086 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30355.t1 ATVLN3, VLN3,... villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08632 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033261001 ATVLN2, VLN2 Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
LOC_Os04g51440.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
LOC_Os06g44890.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Lfl_g07820 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10429481g0030 VLN4, ATVLN4 villin actin-crosslinking factor 0.07 OrthoFinder output from all 47 species
Mp1g24640.1 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Msp_g14171 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05024 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12233 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30299 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g015830.3.1 ATVLN2, VLN2,... villin actin-crosslinking factor 0.05 OrthoFinder output from all 47 species
Spa_g09598 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31418 VLN4, ATVLN4 villin acTin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001712_P002 ATVLN2, VLN2,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e007033_P001 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Zm00001e010507_P006 VLN4, ATVLN4,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e037689_P003 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Zm00001e038175_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 29 110
IPR007123 Gelsolin-like_dom 150 217
IPR007123 Gelsolin-like_dom 410 483
IPR007123 Gelsolin-like_dom 271 338
No external refs found!