AMTR_s00055p00224220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.175

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme


Gene families : OG_01_0001006 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001006_tree ,
OG_02_0008440 (LandPlants) Phylogenetic Tree(s): OG_02_0008440_tree ,
OG_03_0009322 (SeedPlants) Phylogenetic Tree(s): OG_03_0009322_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00224220
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.07 Archaeplastida
GSVIVT01037695001 No alias Carbohydrate metabolism.starch... 0.11 Archaeplastida
Gb_38481 No alias starch branching enzyme 0.05 Archaeplastida
MA_10431704g0010 No alias 1,4-alpha-glucan-branching enzyme 2-2,... 0.03 Archaeplastida
Mp3g21170.1 No alias starch branching enzyme 0.03 Archaeplastida
Pp3c16_13360V3.1 No alias starch branching enzyme 2.1 0.04 Archaeplastida
Pp3c1_1810V3.1 No alias Alpha amylase family protein 0.13 Archaeplastida
Pp3c27_2570V3.1 No alias starch branching enzyme 2.1 0.02 Archaeplastida
Solyc07g064830.3.1 No alias starch branching enzyme 0.06 Archaeplastida
Zm00001e027838_P001 No alias starch branching enzyme 0.06 Archaeplastida
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.07 LandPlants
GSVIVT01037695001 No alias Carbohydrate metabolism.starch... 0.09 LandPlants
Gb_38481 No alias starch branching enzyme 0.02 LandPlants
Mp3g21170.1 No alias starch branching enzyme 0.03 LandPlants
Pp3c1_1810V3.1 No alias Alpha amylase family protein 0.13 LandPlants
Solyc07g064830.3.1 No alias starch branching enzyme 0.06 LandPlants
Zm00001e027838_P001 No alias starch branching enzyme 0.05 LandPlants
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.07 SeedPlants
GSVIVT01037695001 No alias Carbohydrate metabolism.starch... 0.08 SeedPlants
Gb_38481 No alias starch branching enzyme 0.02 SeedPlants
Solyc07g064830.3.1 No alias starch branching enzyme 0.06 SeedPlants
Zm00001e027838_P001 No alias starch branching enzyme 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 756 848
IPR006047 Glyco_hydro_13_cat_dom 382 447
IPR004193 Glyco_hydro_13_N 79 141
No external refs found!