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  5. Mp3g06860.1

Mp3g06860.1


Description : RNA polymerase-IV-positioning factor (SHH). transcription factor (SAWADEE)


Gene families : OG_01_0002006 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002006_tree ,
OG_02_0001458 (LandPlants) Phylogenetic Tree(s): OG_02_0001458_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g06860.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00262800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_03638 No alias Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis... 0.02 Archaeplastida
AMTR_s00011p00262800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
Gb_03638 No alias Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis... 0.02 LandPlants
MA_10426813g0010 No alias no hits & (original description: none) 0.01 LandPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 122 249
No external refs found!