1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_24641

Gb_24641 (AtMYB50, MYB50)


Aliases : AtMYB50, MYB50

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24641

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00107460 MYB19, AtMYB19,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.02 OrthoFinder output from all 47 species
AT1G74080 ATMYB122, MYB122 myb domain protein 122 0.03 OrthoFinder output from all 47 species
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.02 OrthoFinder output from all 47 species
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.02 OrthoFinder output from all 47 species
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 OrthoFinder output from all 47 species
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.03 OrthoFinder output from all 47 species
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 OrthoFinder output from all 47 species
AT5G56110 MYB103,... myb domain protein 103 0.02 OrthoFinder output from all 47 species
AT5G62320 ATMYB99, ATMYBCU15, MYB99 myb domain protein 99 0.03 OrthoFinder output from all 47 species
Aev_g10795 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aev_g26963 AtMYB40, MYB40 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18470 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26835 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Als_g13503 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40583 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08939 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aop_g01825 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Aop_g13885 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aop_g60551 ATMYB61, MYB61 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01384.t1 AtMYB50, MYB50,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35090.t1 AtMYB50, MYB50,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35090.t2 AtMYB50, MYB50,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35097.t1 MYB103,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35098.t1 MYB103,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54012.t1 MYB86, ATMYB86,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57724.t1 ATMIXTA, MYB16,... MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61793.t1 AtMYB85, MYB85,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67189.t1 ATMIXTA, MYB16,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67211.t1 ATMIXTA, MYB16,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67222.t1 ATMIXTA, MYB16,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67223.t1 ATMIXTA, MYB16,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015882 AtMYB97, MYB97 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ceric.08G006600.1 AtMYB107,... not classified & original description: pacid=50638703... 0.03 OrthoFinder output from all 47 species
Ceric.25G018100.1 MYB103,... not classified & original description: pacid=50594460... 0.04 OrthoFinder output from all 47 species
Ceric.27G052300.1 AtMYB85, MYB85,... not classified & original description: pacid=50604875... 0.02 OrthoFinder output from all 47 species
Dcu_g00694 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05482 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dde_g47339 ATMYB4, MYB4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11504 MYB86, ATMYB86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16481 MYB3, ATMYB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008005001 MYB60, AtMYB60 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01012150001 MYB114, AtMYB114 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01025034001 ATMYB59-1,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01028171001 BOS1, AtMYB108, MYB108 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01028328001 ATMYB14, MYB14, MYB14AT RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01031341001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_02419 AtMYB107, MYB107 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_34086 ATMYB5, MYB5 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g07450.1 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g18240.1 ATMYB61, MYB61,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g50720.1 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g51260.1 ATY53, ATMYB67,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g59660.1 MYB33, ATMYB33,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g02370.1 MYB19, AtMYB19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g18480.1 ATMYB35, TDF1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g25550.1 AtMYB50, MYB50,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g26130.1 MYBCOV1, MYB96,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g39470.1 MYB103,... transcription factor (MYB). transcriptional key... 0.02 OrthoFinder output from all 47 species
LOC_Os04g50770.1 MYB58, ATMYB58,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g04820.1 ATMYB61, MYB61,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g02250.1 AtMYB93, MYB93,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os07g37210.1 MYB41, AtMYB41,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os07g44090.3 AtMYB50, MYB50,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g33660.1 ATMIXTA, MYB16,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g33940.1 MYBCOV1, MYB96,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37970.1 AtMYB93, MYB93,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g24800.1 ATMYB94,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g36730.1 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g03440.1 MYB60, AtMYB60,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03150.1 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Len_g57346 MYB3, ATMYB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03025 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13620 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Lfl_g18459 MYB19, AtMYB19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428747g0010 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_10433651g0010 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_10434028g0010 ATMYB21, MYB21, ATMYB3 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_158319g0010 MYB103, AtMYB103 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_2797g0010 ATMYB4, MYB4 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
MA_37256g0010 ATY53, ATMYB67, MYB67 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_6285g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_82197g0010 MYB30, ATMYB30 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
MA_93127g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_95226g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp1g09420.1 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp3g05910.1 MYB33, ATMYB33 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Mp3g23170.1 MYB103,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g07843 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.04 OrthoFinder output from all 47 species
Msp_g07844 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Msp_g19683 MYB76, AtMYB76 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14097 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27829 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Nbi_g30785 MYB3, ATMYB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14426 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c8_16720V3.1 DUO1, Pp3c8_16720 myb-like HTH transcriptional regulator family protein 0.02 OrthoFinder output from all 47 species
Ppi_g04526 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000870 ATMYB4, MYB4 not classified & original description: CDS=1-1719 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017015 AtMYB20, MYB20 not classified & original description: CDS=287-2173 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022799 ATMIXTA, MYB16, ATMYB16 not classified & original description: CDS=262-1308 0.02 OrthoFinder output from all 47 species
Sam_g34700 No alias MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009650.1.1 MYB19, AtMYB19,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Solyc01g010910.2.1 ATMIXTA, MYB16,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc01g111500.3.1 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc03g093930.4.1 ATMYB14, MYB14,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc04g014470.3.1 AtMYB20, MYB20,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc05g007710.3.1 MYB106, NOK,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc05g048830.3.1 AtMYB17, MYB17,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc06g005310.3.1 ATMYB48-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc10g005240.3.1 ATY53, ATMYB67,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc12g099140.2.1 BOS1, AtMYB108,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Spa_g10163 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.07 OrthoFinder output from all 47 species
Tin_g10863 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31077 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001399_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e001803_P001 AtMYB50, MYB50,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Zm00001e004140_P002 ATMIXTA, MYB16,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e004164_P002 AtMYB20, MYB20,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e010822_P001 MYBCOV1, MYB96,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e010995_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e015145_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e017470_P001 AtMYB112,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e020993_P002 AtMYB112,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e022450_P001 ATMIXTA, MYB16,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e023100_P001 MYB19, AtMYB19,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e024690_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e027552_P001 Zm00001e027552 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031799_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e038287_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e041239_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 111 154
IPR001005 SANT/Myb 58 105
No external refs found!