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  5. Gb_24546

Gb_24546


Description : component RPL39 of LSU proteome component


Gene families : OG0008672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008672_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24546
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT2G25210 No alias Ribosomal protein L39 family protein 0.03 OrthoFinder output from all 47 species
LOC_Os02g55370.1 LOC_Os02g55370 component RPL39 of LSU proteome component 0.04 OrthoFinder output from all 47 species
MA_92282g0010 No alias component RPL39 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Pp3c15_14860V3.1 Pp3c15_14860 Ribosomal protein L39 family protein 0.02 OrthoFinder output from all 47 species
Solyc07g005050.3.1 Solyc07g005050 component RPL39 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e023685_P001 Zm00001e023685 component RPL39 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000077 Ribosomal_L39 9 49
No external refs found!