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  5. Gb_24344

Gb_24344


Description : no description available(sp|q6k3d8|glo16_orysj : 165.0)


Gene families : OG0000470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24344

Target Alias Description ECC score Gene Family Method Actions
AT1G02190 No alias Fatty acid hydroxylase superfamily 0.03 OrthoFinder output from all 47 species
AT1G02205 CER1 Fatty acid hydroxylase superfamily 0.04 OrthoFinder output from all 47 species
AT5G57800 CER3, WAX2, YRE, FLP1 Fatty acid hydroxylase superfamily 0.07 OrthoFinder output from all 47 species
Ala_g25145 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.05 OrthoFinder output from all 47 species
Aspi01Gene25539.t1 CER1, Aspi01Gene25539 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Azfi_s0089.g042530 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Azfi_s0335.g065506 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Cba_g69612 CER3, WAX2, YRE, FLP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08364 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Dcu_g16092 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Dde_g46392 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Ehy_g16401 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
GSVIVT01018419001 CER1 Protein ECERIFERUM 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01018420001 CER1 Protein ECERIFERUM 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01018421001 CER1 Cell wall.cutin and suberin.cuticular lipid... 0.06 OrthoFinder output from all 47 species
GSVIVT01023740001 CER3, WAX2, YRE, FLP1 Cell wall.cutin and suberin.cuticular lipid... 0.04 OrthoFinder output from all 47 species
Gb_11787 CER1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.05 OrthoFinder output from all 47 species
Gb_13363 CER3, WAX2, YRE, FLP1 no description available(sp|q69pa8|glo11_orysj : 168.0) 0.05 OrthoFinder output from all 47 species
Gb_13823 CER1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Gb_16836 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Gb_23488 CER3, WAX2, YRE, FLP1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.05 OrthoFinder output from all 47 species
Gb_23964 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.07 OrthoFinder output from all 47 species
Gb_32154 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.06 OrthoFinder output from all 47 species
LOC_Os09g25850.1 CER3, WAX2, YRE,... aldehyde-generating component CER3 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Lfl_g16118 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
MA_10162310g0010 No alias no description available(sp|b8afi3|glo14_orysi : 241.0)... 0.05 OrthoFinder output from all 47 species
MA_10435047g0010 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.04 OrthoFinder output from all 47 species
MA_10435069g0020 CER1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 OrthoFinder output from all 47 species
MA_107531g0010 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.06 OrthoFinder output from all 47 species
MA_139442g0010 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.1 OrthoFinder output from all 47 species
MA_19405g0010 CER3, WAX2, YRE, FLP1 no description available(sp|q69pa8|glo11_orysj : 169.0) 0.06 OrthoFinder output from all 47 species
MA_259293g0010 CER1 no description available(sp|b8afi3|glo14_orysi : 180.0) 0.05 OrthoFinder output from all 47 species
MA_39280g0020 No alias Protein CER1-like 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_781241g0010 CER3, WAX2, YRE, FLP1 no description available(sp|q67wq7|glo13_orysj : 120.0) 0.05 OrthoFinder output from all 47 species
Mp1g14030.1 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Nbi_g09407 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Sam_g26985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo137211 CER3, WAX2, YRE, FLP1 Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo230422 CER1 Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
Smo437448 CER3, WAX2, YRE, FLP1 Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
Smo99824 No alias Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g088430.4.1 CER1, Solyc01g088430 aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Solyc03g117800.4.1 CER3, WAX2, YRE,... aldehyde-generating component CER3 of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Solyc08g044260.4.1 CER1, Solyc08g044260 Protein ECERIFERUM 1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Tin_g45355 CER3, WAX2, YRE, FLP1 aldehyde-generaTing component *(CER3) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Zm00001e012705_P002 CER1, Zm00001e012705 aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Zm00001e013813_P001 CER3, WAX2, YRE,... aldehyde-generating component CER3 of CER1-CER3... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 74 170
No external refs found!